42. Annecke, H. T. P & Eidelpes R, Feyrer H., Gürdap C, Ilgen J., Dasgupta R., Petzold K Optimising In-cell NMR Acquisition for Nucleic Acids, JBNMR 2024
42. Brauser, M.,
Petzold K., Thiele, C. M. Investigating Interaction Dynamics of an Enantioselective Peptide Catalyzed Acylation Reaction 2024. ChemRxiv doi:
10.26434/chemrxiv-2024-pzs58
41.
Dasgupta R.,
Becker W.,
Petzold K. Elucidating microRNA-34a organisation within Human Argonaute-2 by NMR. Nucleic Acids Res. 2024. NAR doi:
https://doi.org/10.1093/nar/gkae744
40.
Sweetapple L., Kosek D.M.,
Banijamali E.,
Becker W., Müller J., Karadiakos C., Baronti L., Guzzetti I., Schritt D., Chen A., Andersson E.R*.,
Petzold K*. Biophysics of microRNA-34a targeting and its influence on down-regulation 2024. bioRxiv doi:
10.1101/2024.02.14.580117.
*Shared corresponding and last author
39. Kosek DM,
Banijamali E,
Becker W,
Petzold K*, Andersson
ER*. Efficient 3′-pairing renders microRNA targeting less sensitive to mRNA seed accessibility. Nucleic Acids Res.
2023 Nov 10;51(20):11162-11177. doi: 10.1093/nar/gkad795.
*Shared corresponding and last author
38. C. Sahin, A. Motso, X. Gu,
H. Feyrer, D. Lama, T. Arndt, A. Rising, G. Valentin Gese, B. M. Hällberg, E. G. Marklund, N. P. Schafer,
K. Petzold, K. Teilum, P. G. Wolynes, and M. Landreh.
Mass Spectrometry of RNA-Binding Proteins during Liquid–Liquid Phase Separation Reveals Distinct Assembly Mechanisms and Droplet Architectures. Journal of the American Chemical Society 2023 doi: 10.1021/jacs.3c00932
37. Grätz L,
Sajkowska-Kozielewicz JJ, Wesslowski J, Kinsolving J, Bridge LJ,
Petzold K, Davidson G, Schulte G, Kozielewicz P.
NanoBiT- and NanoBiT/BRET-based assays allow the analysis of binding kinetics of WNT-3A to endogenous Frizzled 7 in a colorectal cancer model. Br J Pharmacol.
2023 Apr 13. doi: 10.1111/bph.16090.
36.
E. Banijamali,
L. Baronti,
W. Becker,
J. J. Sajkowska-Kozielewicz,
T. Huang, C. Palka, D. Kosek,
L. Sweetapple, J. Müller, M. Stone, E. R. Andersson,
K. Petzold.
RNA:RNA Interaction in Ternary Complexes Resolved by Chemical Probing. RNA
2022, doi:10.1261/rna.079190.122
35. P. Clemente, J. Calvo-Garrido, S. F. Pearce, F. A. Schober, M. Shigematsu, S. J. Siira, I. Laine, H. Spåhr,
C. Steinmetzger,
K. Petzold, Y. Kirino, R. Wibom, O. Rackham, A. Filipovska, J. Rorbach, C. Freyer, A. Wredenberg.
ANGEL2 phosphatase activity is required for non-canonical mitochondrial RNA processing. Nat Commun
2022, doi:
10.1038/s41467-022-33368-9
34.
H. Feyrer,
CO. Gurdap, M. Marušič,
J. Schlagnitweit and
K. Petzold.
Enzymatic incorporation of isotope-labeled adenine into RNA for the study of conformational dynamics by NMR. PLoS ONE
2022, doi:
doi.org/10.1371/journal.pone.0264662
33.
M. Riad,
N. Hopkins,
L. Baronti, H. Karlsson,
J. Schlagnitweit and
K. Petzold.
Mutate-and-Chemical-Shift-Fingerprint (MCSF) to characterize excited states in RNA using NMR spectroscopy. Nature Protocols
2021, doi:
10.1038/s41596-021-00606-1
32.
H. Karlsson,
H. Feyrer,
L. Baronti, and
K. Petzold.
Production of structured RNA fragments by in vitro transcription and HPLC purification. Current Protocols
2021, doi:
10.1002/cpz1.159
31.
H. Feyrer,
J. Schlagnitweit, and
K. Petzold “
Practical aspects of sample preparation and setup of 1H R1ρ relaxation dispersion experiments of RNA” JOVE
2021, doi:
10.3791/62470.
30. R. Schnieders, S. A. Peter,
E. Banijamali,
M. Riad, N. Altincekic, J. K. Bains, B. Ceylan, B. Fürtig, J. T. Grün, M. Hengesbach, K. F. Hohmann, D. Hymon, B. Knezic, A. Oxenfarth,
K. Petzold, N. S. Qureshi, C. Richter,
J. Schlagnitweit, A. Schlundt, H. Schwalbe, E. Stirnal, A. Sudakov, J. Vögele, A. Wacker, J. E. Weigand, J. Wirmer-Bartoschek & J. Wöhnert “
1H, 13C and 15N chemical shift assignment of the stem-loop 5a from the 5′-UTR of SARS-CoV-2” Journal of Biomolecular
NMR Assignments
2021, doi: 10.1007/s12104-021-10007-w
29. Wacker, J. E. Weigand, S. R. Akabayov, N. Altincekic, J. K. Bains,
E. Banijamali, O. Binas, J. Castillo-Martinez, E. Cetiner, B. Ceylan, L.-Y. Chiu, J. Davila-Calderon, K. Dhamotharan, E. Duchardt-Ferner, J. Ferner, L. Frydman, B. Fürtig, J. Gallego, J. T. Grün, C. Hacker, C. Haddad, M. Hähnke, M. Hengesbach, F. Hiller, K. F. Hohmann, D. Hymon, V. de Jesus, H. Jonker, H. Keller, B. Knezic, T. Landgraf, F. Löhr, L. Luo, K. R. Mertinkus, C. Muhs, M. Novakovic, A. Oxenfarth, M. Palomino-Schätzlein,
K. Petzold, S. A. Peter, D. J. Pyper, N. S. Qureshi,
M. Riad, C. Richter, K. Saxena, T. Schamber, T. Scherf,
J. Schlagnitweit, A. Schlundt, R. Schnieders, H. Schwalbe, A. Simba-Lahuasi, S. Sreeramulu, E. Stirnal, A. Sudakov, J.-N. Tants, B. S. Tolbert, J. Vögele, L. Weiß, J. Wirmer-Bartoschek, M. A. Wirtz Martin, J. Wöhnert & H. Zetzsche “
Secondary structure determination of conserved SARS-CoV-2 RNA elements by NMR spectroscopy” Nucleic Acid Research
2020, doi: 10.1093/nar/gkaa1013
28.
L. Baronti,
I. Guzzetti†, P. Ebrahimi
†,
S. Friebe Sandoz†,
E. Steiner†, J. Schlagnitweit, B. Fromm, L. Silva, C. Fontana, A. Chen and
K. Petzold “
Base-pair conformational switch modulates miR-34a targeting of Sirt1 mRNA” Nature
2020, doi: 10.1038/s41586-020-2336-3
† These people contributed equally
News & Views: “From transient recognition to efficient silencing: a RISCky business”
27.
H. Karlsson,
L. Baronti and
K. Petzold “
A robust and versatile method for production and purification of large-scale RNA samples for structural biology” RNA
2020, doi: 10.1261/rna.075697.120
26.
H. Feyrer,
R. Munteanu,
L. Baronti and
K. Petzold “
One-Pot Production of RNA in High Yield and Purity Through Cleaving Tandem Transcripts” Molecules
2020,
25(5), 1142.
25.
P. Ebrahimi, S.Kaur, L. Baronti, K. Petzold and A. Chen “A two-dimensional Replica-Exchange Molecular Dynamics method for simulating RNA folding using sparse experimental restraints” Methods 162-163:96-107, 2019
24.
M. Marušić, J. Schlagnitweit and K. Petzold “RNA dynamics by NMR” ChemBioChem 2019, 20, 2685-2710 
23. J. Schlagnitweit, S. Friebe Sandoz, A. Jaworski, I. Guzzetti, F. Aussenac, R. J. Carbajo, E. Chiarparin, A. J. Pell and K. Petzold*, “Observing an antisense drug complex in intact human cells by in-cell NMR” ChemBioChem, 20(19): 2474-2478, 2019
22. J. Schlagnitweit, E. Steiner, H. Karlsson and K. Petzold “Efficient detection of structure and dynamics in unlabeled RNAs: the SELOPE approach” Chemistry – A European Journal; 24(23):6067-6070, 2018.
21. L. Baronti, H. Karlsson, M. Marušić, K. Petzold “A guide to large-scale RNA sample preparation” Analytical and Bioanalytical Chemistry, 1-14 Volume 410, Issue 14, pp 3239–3252, 2018
20. M. Niklasson, R. Otten, A. Ahlner†, C. Andresen†, J. Schlagnitweit†, K. Petzold and P. Lundström “Comprehensive analysis of NMR data using advanced line shape fitting” J Biomol NMR 69: pp 93-99, 2017.
† These people contributed equally
19. E. Steiner, J. Schlagnitweit, P. Lundström and K. Petzold. “Capturing Excited States in the Fast-Intermediate Exchange Time-Limit in Biological Systems Using 1H NMR Spectroscopy”, Angew Chem Int Edit 2016, 55 (51), 15869–15872, 2016. 
18. L. Salmon, G.M. Giambaşu, E.N. Nikolova, K. Petzold, A. Bhattacharya, D.A. Case, H.M. Al-Hashimi. “Modulating RNA Alignment Using Directional Dynamic Kinks: Application in Determining an Atomic-Resolution Ensemble for a Hairpin using NMR Residual Dipolar Couplings.” J Am Chem Soc., 137 (40), pp 12954–12965, 2015
17. I.J. Kimsey, K. Petzold, B. Sathyamoorthy, Z.W. Stein and H.M. Al-Hashimi “Visualizing Transient Watson-Crick Like Mispairs in DNA and RNA Duplexes” Nature, 519 (7543), pp 315-320, 2015
ISI web of knowledge data base: As of March/April 2018, this highly cited paper received enough citations to place it in the top 1% of the academic field of Biology & Biochemistry based on a highly cited threshold for the field and publication year 
16. S.A. Pawar, A.M. Jabgunde, K. Petzold, G.E.M. Maguire, D.D. Dhavale, H.G. Kruger and T.Govender, “Investigation and folding pattern of L-ido and D-gluco peptides by EASY ROESY NMR and X-ray”, RSC Advances, 3, 23355- 23369, 2013
15. M.M. Makatini, K. Petzold, C.N. Alves, P.I. Arvidsson, B. Honarparvar, P. Govender,. T. Govender., H.G. Kruger,. Y. Sayed, J. Lameira, G.E.M. Maguire,and M.E.S. Soliman “Synthesis, 2D-NMR and Molecular Modelling Studies of Pentacyclo-Undecane Lactam Peptides and Peptoids as Potential HIV-1 Wild type C-SA Protease Inhibitors”, Journal of Enzyme Inhibition And Medicinal Chemistry, 28(1): 78–88, 2013
14. E.A. Dethoff†, K. Petzold†, J. Chugh†, A. Casiano-Negroni and H.M. Al-Hashimi, “Visualizing Transient Low-Populated Structures of RNA”, Nature; 491 (7426), pp 724-728, 2012
† These people contributed equally
